Early Alzheimer?s disease diagnosis using an XG-Boost model applied to MRI images

Authors

  • Khoi Nguyen School of Biomedical Engineering, International University, Viet Nam; Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Viet Nam
  • My Nguyen Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Viet Nam; Faculty of Biology ? Biotechnology, University of Science, Viet Nam
  • Khiet Dang School of Biomedical Engineering, International University, Viet Nam; Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Viet Nam
  • Bao Pham School of Biomedical Engineering, International University, Viet Nam; Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Viet Nam
  • Vy Huynh Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Viet Nam; Faculty of Biology ? Biotechnology, University of Science, Viet Nam
  • Toi Vo School of Biomedical Engineering, International University, Viet Nam; Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Viet Nam
  • Lua Ngo School of Biomedical Engineering, International University, Viet Nam; Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Viet Nam
  • Huong Ha School of Biomedical Engineering, International University, Viet Nam; Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Viet Nam

DOI:

https://doi.org/10.15419/bmrat.v10i9.832

Keywords:

Alzheimer's disease, Early mild cognitive impairment, early diagnosis, three-class classification, XG- Boost

Abstract

Introduction: Early Alzheimer's disease (AD) diagnosis is critical to improving the success of new treatments in clinical trials, especially at the early mild cognitive impairment (EMCI) stage. This study aimed to tackle this problem by developing an accurate classification model for early AD detection at the EMCI stage based on magnetic resonance imaging (MRI).

Methods: This study developed the proposed classification model through a machine-learning pipeline with three main steps. First, features were extracted from MRI images using FreeSurfer. Second, the extracted features were filtered using principal component analysis (PCA), backward elimination (BE), and extreme gradient (XG)-Boost importance (XGBI), the efficiency of which was evaluated. Finally, the selected features were combined with cognitive scores (Mini Mental State Examination [MMSE] and Clinical Dementia Rating [CDR]) to create an XG-Boost three-class classifier: AD vs. EMCI vs. cognitively normal (CN).

Results: The MMSE and CDR had the highest importance weights, followed by the thickness of the left superior temporal sulcus and banks of the superior temporal lobe. Without feature selection, the model had the lowest accuracy of 69.0%. After feature selection and the addition of cognitive scores, the accuracy of the PCA, BE, and XGBI approaches improved to 74.0%, 90.9%, and 91.5%, respectively. The BE with tuning parameters model was chosen as the final model since it had the highest accuracy of 92.0%. The area under the receiver operating characteristic curve for the CN, AD, and EMCI classes were 0.98, 0.94, and 0.88, respectively.

Conclusion: Our proposed model shows promise in early AD diagnosis and can be fine-tuned in the future through testing on a multi-dataset.

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Published

2023-09-30

Issue

Section

Original Research

How to Cite

Early Alzheimer?s disease diagnosis using an XG-Boost model applied to MRI images. (2023). Biomedical Research and Therapy, 10(9), 5896-5911. https://doi.org/10.15419/bmrat.v10i9.832

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